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nucleotide composition analysis software macvector version 13.5.2  (MacVector inc)

 
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    Structured Review

    MacVector inc nucleotide composition analysis software macvector version 13.5.2
    Nucleosome position at DAFC-66D is largely determined by primary DNA sequence. ( A ) Comparison of observed nucleosome occupancy at DAFC-66D in follicle cells in stage 10 (dark blue) with predicted nucleosome occupancy (light blue) based on nucleosome DNA sequence preferences ( , ). Red asterisks indicate three predicted nucleosome positions that were less occupied in vivo than predicted. ( B and C ) Expanded view of predicted and observed nucleosome occupancy at ACE3 ( B ) and Ori-β ( C ), with <t>nucleotide</t> <t>composition</t> plotted above (see color key). Nucleosome occupied sites are relatively GC rich (black and blue), while nucleosome depleted regions in ACE3 and Ori-β contain extended poly A:T tracts (red and green) that correspond to ORC binding sites.
    Nucleotide Composition Analysis Software Macvector Version 13.5.2, supplied by MacVector inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/nucleotide composition analysis software macvector version 13.5.2/product/MacVector inc
    Average 90 stars, based on 1 article reviews
    nucleotide composition analysis software macvector version 13.5.2 - by Bioz Stars, 2026-03
    90/100 stars

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    1) Product Images from "DNA sequence templates adjacent nucleosome and ORC sites at gene amplification origins in Drosophila"

    Article Title: DNA sequence templates adjacent nucleosome and ORC sites at gene amplification origins in Drosophila

    Journal: Nucleic Acids Research

    doi: 10.1093/nar/gkv766

    Nucleosome position at DAFC-66D is largely determined by primary DNA sequence. ( A ) Comparison of observed nucleosome occupancy at DAFC-66D in follicle cells in stage 10 (dark blue) with predicted nucleosome occupancy (light blue) based on nucleosome DNA sequence preferences ( , ). Red asterisks indicate three predicted nucleosome positions that were less occupied in vivo than predicted. ( B and C ) Expanded view of predicted and observed nucleosome occupancy at ACE3 ( B ) and Ori-β ( C ), with nucleotide composition plotted above (see color key). Nucleosome occupied sites are relatively GC rich (black and blue), while nucleosome depleted regions in ACE3 and Ori-β contain extended poly A:T tracts (red and green) that correspond to ORC binding sites.
    Figure Legend Snippet: Nucleosome position at DAFC-66D is largely determined by primary DNA sequence. ( A ) Comparison of observed nucleosome occupancy at DAFC-66D in follicle cells in stage 10 (dark blue) with predicted nucleosome occupancy (light blue) based on nucleosome DNA sequence preferences ( , ). Red asterisks indicate three predicted nucleosome positions that were less occupied in vivo than predicted. ( B and C ) Expanded view of predicted and observed nucleosome occupancy at ACE3 ( B ) and Ori-β ( C ), with nucleotide composition plotted above (see color key). Nucleosome occupied sites are relatively GC rich (black and blue), while nucleosome depleted regions in ACE3 and Ori-β contain extended poly A:T tracts (red and green) that correspond to ORC binding sites.

    Techniques Used: Sequencing, Comparison, In Vivo, Binding Assay



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    MacVector inc nucleotide composition analysis software macvector version 13.5.2
    Nucleosome position at DAFC-66D is largely determined by primary DNA sequence. ( A ) Comparison of observed nucleosome occupancy at DAFC-66D in follicle cells in stage 10 (dark blue) with predicted nucleosome occupancy (light blue) based on nucleosome DNA sequence preferences ( , ). Red asterisks indicate three predicted nucleosome positions that were less occupied in vivo than predicted. ( B and C ) Expanded view of predicted and observed nucleosome occupancy at ACE3 ( B ) and Ori-β ( C ), with <t>nucleotide</t> <t>composition</t> plotted above (see color key). Nucleosome occupied sites are relatively GC rich (black and blue), while nucleosome depleted regions in ACE3 and Ori-β contain extended poly A:T tracts (red and green) that correspond to ORC binding sites.
    Nucleotide Composition Analysis Software Macvector Version 13.5.2, supplied by MacVector inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/nucleotide composition analysis software macvector version 13.5.2/product/MacVector inc
    Average 90 stars, based on 1 article reviews
    nucleotide composition analysis software macvector version 13.5.2 - by Bioz Stars, 2026-03
    90/100 stars
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    Nucleosome position at DAFC-66D is largely determined by primary DNA sequence. ( A ) Comparison of observed nucleosome occupancy at DAFC-66D in follicle cells in stage 10 (dark blue) with predicted nucleosome occupancy (light blue) based on nucleosome DNA sequence preferences ( , ). Red asterisks indicate three predicted nucleosome positions that were less occupied in vivo than predicted. ( B and C ) Expanded view of predicted and observed nucleosome occupancy at ACE3 ( B ) and Ori-β ( C ), with nucleotide composition plotted above (see color key). Nucleosome occupied sites are relatively GC rich (black and blue), while nucleosome depleted regions in ACE3 and Ori-β contain extended poly A:T tracts (red and green) that correspond to ORC binding sites.

    Journal: Nucleic Acids Research

    Article Title: DNA sequence templates adjacent nucleosome and ORC sites at gene amplification origins in Drosophila

    doi: 10.1093/nar/gkv766

    Figure Lengend Snippet: Nucleosome position at DAFC-66D is largely determined by primary DNA sequence. ( A ) Comparison of observed nucleosome occupancy at DAFC-66D in follicle cells in stage 10 (dark blue) with predicted nucleosome occupancy (light blue) based on nucleosome DNA sequence preferences ( , ). Red asterisks indicate three predicted nucleosome positions that were less occupied in vivo than predicted. ( B and C ) Expanded view of predicted and observed nucleosome occupancy at ACE3 ( B ) and Ori-β ( C ), with nucleotide composition plotted above (see color key). Nucleosome occupied sites are relatively GC rich (black and blue), while nucleosome depleted regions in ACE3 and Ori-β contain extended poly A:T tracts (red and green) that correspond to ORC binding sites.

    Article Snippet: Nucleotide composition at DAFC-66D was determined over a sliding 50 bp window using the nucleotide composition analysis software of MacVector (version 13.5.2) ( ).

    Techniques: Sequencing, Comparison, In Vivo, Binding Assay